M. Rasetti, E. Merelli (2015), The topological field theory of data: A program towards a novel strategy for data mining through data language. J of Physics: CS 626 (1)
E. Merelli, M. Pettini, M. Rasetti (2015), Topology driven modeling: the IS metaphor, Natural Computing 14(3)
N. Paoletti, P. Liò, E. Merelli, M. Viceconti (2012), Multilevel Computational Modeling and Quantitative Analysis of Bone Remodeling, IEEE/ACM Trans Comput Biology Bioinform 9(5)
Roberta Alfieri, Ezio Bartocci, Emanuela Merelli, Luciano Milanesi (2011), Modeling the cell cycle: From deterministic models to hybrid systems, Biosystems 105(1)
E. Bartocci, F. Corradini, E. Merelli, L. Tesei (2010), Detecting synchronisation of biological oscillators by model checking, Theor Comput Sci 411(20)
E. Bartocci, F. Corradini, M. R. Di Berardini, E. Merelli, L. Tesei (2010), Shape Calculus. A Spatial Mobile Calculus for 3D Shapes. Sci Ann Comp Sci 20
E. Bartocci, D. Cacciagrano, N. Cannata, F. Corradini, E. Merelli, L. Milanesi, P. Romano (2007), An agent-based multilayer architecture for bioinformatics grids, IEEE Trans Nanobioscience 6(2)
E. Merelli, G. Armano, N. Cannata, F. Corradini, M. d'Inverno, A. Doms, P.W. Lord, A. Martin, L. Milanesi, S. Moeller, M. Schroeder, M. Luck (2007), Agents in bioinformatics, computational and systems biology. Briefings in Bioinformatics 8(1)
N. Cannata, E. Merelli, R.B. Altman (2005), Time to Organize the Bioinformatics Resourceome, PLoS Computational Biology 1(7)
F. Pezzella, E. Merelli (2000), A tabu search method guided by shifting bottleneck for the job shop scheduling problem, EJOR, 120(2)